STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYP_1211Transcriptional regulator, crp/fnr family protein. (199 aa)    
Predicted Functional Partners:
MYP_289
GAF sensor hybrid histidine kinase.
   
 0.817
MYP_3984
Cyclic nucleotide-binding protein.
  
  
  0.778
MYP_884
Crp/Fnr family transcriptional regulator.
  
  
  0.778
MYP_2429
Hypothetical protein.
  
  
  0.777
MYP_4706
cAMP-binding protein.
  
     0.774
MYP_1856
Glutamate synthase (NADH) large subunit.
    
 0.768
MYP_1488
Hypothetical protein.
   
 0.759
MYP_398
Beta-ketoacyl synthase.
     
 0.734
MYP_3779
Hypothetical protein.
    
 0.728
MYP_175
Signal transduction histidine kinase.
   
 0.706
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.