STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYP_125Hypothetical protein. (249 aa)    
Predicted Functional Partners:
MYP_124
LytT family sensor histidine kinase.
  0.977
MYP_1493
Signal transduction histidine kinase LytS.
  
  0.914
MYP_3217
Signal transduction histidine kinase LytS.
  
  0.911
MYP_123
Hypothetical protein.
 
    0.902
MYP_2983
Signal transduction histidine kinase, lyts.
  
  0.890
MYP_3964
Putative regulator of cell autolysis.
  
  0.867
MYP_3244
Hypothetical protein.
  
  0.866
MYP_3649
Hypothetical protein.
  
  0.866
MYP_3092
Hypothetical protein.
  
  0.863
MYP_289
GAF sensor hybrid histidine kinase.
    
 0.732
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.