Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MYP_1299 | MYP_13 | MYP_1299 | MYP_13 | Peptidase S41; Belongs to the peptidase S41A family. | Peptidase. | 0.452 |
MYP_1299 | MYP_1796 | MYP_1299 | MYP_1796 | Peptidase S41; Belongs to the peptidase S41A family. | Endoglucanase-like protein. | 0.419 |
MYP_1299 | MYP_4459 | MYP_1299 | MYP_4459 | Peptidase S41; Belongs to the peptidase S41A family. | Hypothetical protein. | 0.502 |
MYP_1299 | MYP_4570 | MYP_1299 | MYP_4570 | Peptidase S41; Belongs to the peptidase S41A family. | Peptidyl-prolyl cis-trans isomerase. | 0.434 |
MYP_1299 | MYP_971 | MYP_1299 | MYP_971 | Peptidase S41; Belongs to the peptidase S41A family. | Peptidoglycan-binding lytic transglycosylase. | 0.526 |
MYP_1299 | glyA | MYP_1299 | MYP_4420 | Peptidase S41; Belongs to the peptidase S41A family. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.465 |
MYP_1299 | mltG | MYP_1299 | MYP_53 | Peptidase S41; Belongs to the peptidase S41A family. | Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. | 0.449 |
MYP_1299 | mltG-2 | MYP_1299 | MYP_746 | Peptidase S41; Belongs to the peptidase S41A family. | Aminodeoxychorismate lyase-like protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | 0.421 |
MYP_1299 | pheT | MYP_1299 | MYP_79 | Peptidase S41; Belongs to the peptidase S41A family. | phenylalanyl-tRNA synthetase subunit beta; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.436 |
MYP_1299 | secD | MYP_1299 | MYP_1989 | Peptidase S41; Belongs to the peptidase S41A family. | Bifunctional preprotein translocase subunit SecD/SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | 0.538 |
MYP_13 | MYP_1299 | MYP_13 | MYP_1299 | Peptidase. | Peptidase S41; Belongs to the peptidase S41A family. | 0.452 |
MYP_13 | MYP_4459 | MYP_13 | MYP_4459 | Peptidase. | Hypothetical protein. | 0.418 |
MYP_13 | secD | MYP_13 | MYP_1989 | Peptidase. | Bifunctional preprotein translocase subunit SecD/SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | 0.476 |
MYP_1796 | MYP_1299 | MYP_1796 | MYP_1299 | Endoglucanase-like protein. | Peptidase S41; Belongs to the peptidase S41A family. | 0.419 |
MYP_4459 | MYP_1299 | MYP_4459 | MYP_1299 | Hypothetical protein. | Peptidase S41; Belongs to the peptidase S41A family. | 0.502 |
MYP_4459 | MYP_13 | MYP_4459 | MYP_13 | Hypothetical protein. | Peptidase. | 0.418 |
MYP_4459 | MYP_971 | MYP_4459 | MYP_971 | Hypothetical protein. | Peptidoglycan-binding lytic transglycosylase. | 0.420 |
MYP_4570 | MYP_1299 | MYP_4570 | MYP_1299 | Peptidyl-prolyl cis-trans isomerase. | Peptidase S41; Belongs to the peptidase S41A family. | 0.434 |
MYP_4570 | MYP_971 | MYP_4570 | MYP_971 | Peptidyl-prolyl cis-trans isomerase. | Peptidoglycan-binding lytic transglycosylase. | 0.432 |
MYP_4570 | secD | MYP_4570 | MYP_1989 | Peptidyl-prolyl cis-trans isomerase. | Bifunctional preprotein translocase subunit SecD/SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | 0.451 |
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