STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYP_1402Hypothetical protein Fjoh_4182. (118 aa)    
Predicted Functional Partners:
MYP_1401
Hypothetical protein.
 
     0.864
MYP_1400
Diguanylate cyclase.
 
     0.828
MYP_2661
Hypothetical protein.
  
     0.543
MYP_2945
Uncharacterized protein.
  
 
   0.540
MYP_1406
Hypothetical protein.
 
  
  0.537
MYP_1403
Pirin; Belongs to the pirin family.
       0.503
MYP_1404
Hypothetical protein.
       0.503
MYP_1405
Hypothetical protein.
       0.503
MYP_3779
Hypothetical protein.
    
 0.480
metG
Hypothetical protein; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
    
  0.479
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.