Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MYP_1132 | MYP_1443 | MYP_1132 | MYP_1443 | Delta-1-pyrroline-5-carboxylate dehydrogenase. | Proline dehydrogenase. | 0.949 |
MYP_1132 | MYP_1856 | MYP_1132 | MYP_1856 | Delta-1-pyrroline-5-carboxylate dehydrogenase. | Glutamate synthase (NADH) large subunit. | 0.916 |
MYP_1132 | MYP_3076 | MYP_1132 | MYP_3076 | Delta-1-pyrroline-5-carboxylate dehydrogenase. | Hypothetical protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.462 |
MYP_1132 | MYP_3485 | MYP_1132 | MYP_3485 | Delta-1-pyrroline-5-carboxylate dehydrogenase. | Nitric oxide dioxygenase. | 0.729 |
MYP_1132 | MYP_47 | MYP_1132 | MYP_47 | Delta-1-pyrroline-5-carboxylate dehydrogenase. | Sodium:solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.462 |
MYP_1132 | MYP_805 | MYP_1132 | MYP_805 | Delta-1-pyrroline-5-carboxylate dehydrogenase. | Citrate synthase; Belongs to the citrate synthase family. | 0.600 |
MYP_1132 | gcvP | MYP_1132 | MYP_1230 | Delta-1-pyrroline-5-carboxylate dehydrogenase. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.899 |
MYP_1132 | proC | MYP_1132 | MYP_2318 | Delta-1-pyrroline-5-carboxylate dehydrogenase. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.878 |
MYP_1132 | purL | MYP_1132 | MYP_1467 | Delta-1-pyrroline-5-carboxylate dehydrogenase. | Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | 0.697 |
MYP_1442 | MYP_1443 | MYP_1442 | MYP_1443 | Cytochrome C4. | Proline dehydrogenase. | 0.690 |
MYP_1442 | MYP_1856 | MYP_1442 | MYP_1856 | Cytochrome C4. | Glutamate synthase (NADH) large subunit. | 0.467 |
MYP_1442 | MYP_805 | MYP_1442 | MYP_805 | Cytochrome C4. | Citrate synthase; Belongs to the citrate synthase family. | 0.592 |
MYP_1443 | MYP_1132 | MYP_1443 | MYP_1132 | Proline dehydrogenase. | Delta-1-pyrroline-5-carboxylate dehydrogenase. | 0.949 |
MYP_1443 | MYP_1442 | MYP_1443 | MYP_1442 | Proline dehydrogenase. | Cytochrome C4. | 0.690 |
MYP_1443 | MYP_1856 | MYP_1443 | MYP_1856 | Proline dehydrogenase. | Glutamate synthase (NADH) large subunit. | 0.895 |
MYP_1443 | MYP_3076 | MYP_1443 | MYP_3076 | Proline dehydrogenase. | Hypothetical protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.840 |
MYP_1443 | MYP_3485 | MYP_1443 | MYP_3485 | Proline dehydrogenase. | Nitric oxide dioxygenase. | 0.760 |
MYP_1443 | MYP_47 | MYP_1443 | MYP_47 | Proline dehydrogenase. | Sodium:solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.866 |
MYP_1443 | MYP_805 | MYP_1443 | MYP_805 | Proline dehydrogenase. | Citrate synthase; Belongs to the citrate synthase family. | 0.702 |
MYP_1443 | gcvP | MYP_1443 | MYP_1230 | Proline dehydrogenase. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.829 |
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