STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYP_145Sulfate ABC transporter ATP-binding protein. (288 aa)    
Predicted Functional Partners:
MYP_147
Nitrate ABC transporter.
 
 0.999
MYP_146
Nitrate ABC transporter permease.
 
 0.997
MYP_1549
Hypothetical protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
   
 0.962
MYP_144
Nitrate reductase, nitrite reductase (NAD(P)H); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
  
 0.942
MYP_72
Hypothetical protein.
  
 
 0.908
MYP_3887
Nitrate reductase/nitrite reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
  
 0.877
MYP_2185
Hypothetical protein.
 
    
 0.766
MYP_148
Hypothetical protein.
 
     0.705
MYP_421
Multidrug ABC transporter permease.
 
      0.694
MYP_143
Sulfite reductase subunit beta hemoprotein.
 
   
 0.691
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
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