STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYP_1605Hypothetical protein FAES_3780. (217 aa)    
Predicted Functional Partners:
MYP_1606
Molybdopterin-binding oxidoreductase.
 
  0.980
MYP_4752
Molybdopterin oxidoreductase.
   
 
 0.882
MYP_3921
Hypothetical protein.
  
     0.722
MYP_609
Ubiquinone/menaquinone biosynthesis methylase.
  
     0.618
MYP_1604
Phytochrome-like protein cph1.
       0.524
MYP_4876
Outer membrane protein.
  
     0.483
MYP_4878
Membrane protein.
  
     0.480
MYP_2865
Major facilitator transporter.
  
     0.458
MYP_2183
Hypothetical protein.
  
     0.457
MYP_2529
Hypothetical protein.
  
     0.442
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.