STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYP_167Radical SAM protein. (487 aa)    
Predicted Functional Partners:
MYP_576
Polyphosphate kinase.
   
    0.801
MYP_165
Membrane protein.
       0.746
MYP_166
Hypothetical protein.
       0.746
MYP_3145
Bifunctional cbb3-type cytochrome C oxidase subunit I/II; Belongs to the heme-copper respiratory oxidase family.
   
  
 0.665
MYP_402
Hypothetical protein.
   
 
 0.564
MYP_4431
1,4-dihydroxy-2-naphthoate octaprenyltransferase.
   
 
 0.511
MYP_475
Hypothetical protein all0419.
   
 
 0.511
MYP_4798
Geranylgeranylglycerol-phosphate geranylgeranyltransferase.
   
 
 0.511
MYP_168
Hypothetical protein.
       0.494
MYP_4592
Membrane protein.
   
 
 0.471
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.