STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYP_1684B-glycosyltransferase. (333 aa)    
Predicted Functional Partners:
MYP_1681
Hypothetical protein Solca_3574.
 
  
  0.834
MYP_1682
4-amino-4-deoxy-L-arabinose transferase,lipid A modification.
 
 
  0.827
MYP_1683
Hypothetical protein.
 
    0.806
MYP_564
Glycosyl transferase family protein.
  
  
  0.777
MYP_4447
Hypothetical protein.
  
 
  0.663
MYP_3497
Dolichyl-phosphate beta-D-mannosyltransferase.
  
  
 
0.603
MYP_1047
Glycosyl transferase.
  
  
  0.562
MYP_3779
Hypothetical protein.
  
 
 0.473
MYP_400
Non-ribosomal peptide synthetase module containing protein.
  
 0.468
MYP_2039
Dolichyl-phosphate-mannose-protein mannosyltransferase.
 
 
  0.464
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.