STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYP_1708Hypothetical protein. (193 aa)    
Predicted Functional Partners:
MYP_289
GAF sensor hybrid histidine kinase.
  
 0.993
MYP_1707
Chemotaxis protein CheR.
 
  0.982
MYP_4888
Chemotaxis protein CheA.
 
 0.980
MYP_4868
Chemotaxis protein CheA.
 
 0.979
MYP_1706
Hypothetical protein.
 
 0.976
MYP_175
Signal transduction histidine kinase.
 
 0.965
MYP_176
Chemotaxis protein CheR.
 
  0.947
MYP_485
Multi-sensor hybrid histidine kinase.
 
 0.940
MYP_163
PAS domain-containing protein.
  
 0.934
MYP_371
Protein-glutamate O-methyltransferase CheR.
 
  0.930
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.