STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYP_1711Peptidase S8/S53 subtilisin kexin sedolisin. (1196 aa)    
Predicted Functional Partners:
MYP_3637
LamG domain protein jellyroll fold domain protein.
  
 
  0.575
MYP_3548
Glycosyl hydrolase, family 18.
  
  
  0.567
MYP_4858
5'-nucleotidase.
  
 
  0.546
MYP_135
Hypothetical protein.
  
 
  0.543
MYP_3039
PKD domain protein.
  
 
  0.538
MYP_1710
FG-GAP repeat-containing protein.
  
 
  0.532
MYP_185
Hypothetical protein CHU_3654.
  
  0.507
MYP_4091
Hypothetical protein ACD_15C00149G0001.
  
  0.506
MYP_1973
Hypothetical protein.
  
 
  0.505
MYP_3276
Hypothetical protein Mhun_0418, partial.
  
 
  0.494
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.