STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYP_1717Hypothetical protein. (310 aa)    
Predicted Functional Partners:
MYP_1718
Hypothetical protein.
 
 
 0.961
MYP_422
ABC transporter permease.
 
 
 0.945
MYP_421
Multidrug ABC transporter permease.
 
 
 
 0.938
MYP_2215
ABC transporter permease.
 
 0.934
MYP_1716
Hypothetical protein.
       0.718
MYP_1715
Hypothetical protein.
       0.703
MYP_2185
Hypothetical protein.
   
 0.658
MYP_4752
Molybdopterin oxidoreductase.
     
 0.619
MYP_2963
F0F1 ATP synthase subunit beta.
    
 
 0.604
atpD
F0F1 ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
 
 0.604
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.