STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYP_1723Hypothetical protein CHU_1284. (147 aa)    
Predicted Functional Partners:
MYP_1839
Hypothetical protein.
  
     0.745
MYP_2118
Hypothetical protein.
  
     0.696
MYP_1026
Hypothetical protein.
  
     0.665
MYP_3809
Hypothetical protein CHU_1399.
  
     0.637
MYP_4452
Hypothetical protein CHU_3275.
  
     0.614
MYP_2354
Hypothetical protein.
  
     0.609
MYP_4560
Hypothetical protein CHU_0375.
  
     0.591
MYP_2525
Hypothetical protein.
  
     0.589
MYP_4038
Hypothetical protein.
  
     0.579
ddl
D-alanine--D-alanine ligase A; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
  
     0.570
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.