Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MYP_1783 | MYP_1784 | MYP_1783 | MYP_1784 | Hypothetical protein. | Anthranilate synthase,component II. | 0.999 |
MYP_1783 | MYP_3774 | MYP_1783 | MYP_3774 | Hypothetical protein. | Para-aminobenzoate synthase, aminase component. | 0.772 |
MYP_1783 | MYP_401 | MYP_1783 | MYP_401 | Hypothetical protein. | Hypothetical protein. | 0.986 |
MYP_1783 | MYP_4671 | MYP_1783 | MYP_4671 | Hypothetical protein. | Hypothetical protein. | 0.970 |
MYP_1783 | aroC | MYP_1783 | MYP_4554 | Hypothetical protein. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.934 |
MYP_1783 | trpA | MYP_1783 | MYP_1789 | Hypothetical protein. | Tryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.966 |
MYP_1783 | trpB | MYP_1783 | MYP_1788 | Hypothetical protein. | Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.976 |
MYP_1783 | trpC | MYP_1783 | MYP_1786 | Hypothetical protein. | Indole-3-glycerol-phosphate synthase; Belongs to the TrpC family. | 0.999 |
MYP_1783 | trpD | MYP_1783 | MYP_1785 | Hypothetical protein. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.999 |
MYP_1783 | trpF | MYP_1783 | MYP_1787 | Hypothetical protein. | Hypothetical protein; Belongs to the TrpF family. | 0.970 |
MYP_1784 | MYP_1783 | MYP_1784 | MYP_1783 | Anthranilate synthase,component II. | Hypothetical protein. | 0.999 |
MYP_1784 | MYP_3774 | MYP_1784 | MYP_3774 | Anthranilate synthase,component II. | Para-aminobenzoate synthase, aminase component. | 0.999 |
MYP_1784 | MYP_401 | MYP_1784 | MYP_401 | Anthranilate synthase,component II. | Hypothetical protein. | 0.984 |
MYP_1784 | MYP_4671 | MYP_1784 | MYP_4671 | Anthranilate synthase,component II. | Hypothetical protein. | 0.957 |
MYP_1784 | aroC | MYP_1784 | MYP_4554 | Anthranilate synthase,component II. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.946 |
MYP_1784 | trpA | MYP_1784 | MYP_1789 | Anthranilate synthase,component II. | Tryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.990 |
MYP_1784 | trpB | MYP_1784 | MYP_1788 | Anthranilate synthase,component II. | Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.989 |
MYP_1784 | trpC | MYP_1784 | MYP_1786 | Anthranilate synthase,component II. | Indole-3-glycerol-phosphate synthase; Belongs to the TrpC family. | 0.999 |
MYP_1784 | trpD | MYP_1784 | MYP_1785 | Anthranilate synthase,component II. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.999 |
MYP_1784 | trpF | MYP_1784 | MYP_1787 | Anthranilate synthase,component II. | Hypothetical protein; Belongs to the TrpF family. | 0.982 |
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