STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYP_1796Endoglucanase-like protein. (1073 aa)    
Predicted Functional Partners:
MYP_1436
Hypothetical protein.
  
 
  0.788
MYP_3786
Hypothetical protein.
  
 
  0.788
MYP_1753
Retaining beta-glycosidase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
 
  0.770
MYP_4611
Pectate lyase.
  
  
  0.761
MYP_2074
Bifunctional acetylxylan esterase/xylanase, CBM4 module.
  
     0.757
MYP_3331
Xylanase.
  
     0.748
MYP_2111
Xylanase; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
  
  
  0.747
MYP_2099
Hypothetical protein.
  
 
  0.746
MYP_2082
Carbohydrate-binding family 6 protein.
  
     0.740
MYP_4094
FG-GAP repeat-containing protein.
  
 
  0.739
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.