STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYP_1845Hypothetical protein. (350 aa)    
Predicted Functional Partners:
MYP_1848
Hypothetical protein.
   
 0.787
MYP_984
B-glucosidase, glycoside hydrolase family 3 protein.
     
 0.608
MYP_2756
Chitosanase-glucanase; Belongs to the glycosyl hydrolase 8 (cellulase D) family.
     
 0.566
MYP_5011
Hypothetical protein.
  
     0.531
MYP_1846
Hypothetical protein SGRA_1855.
       0.527
MYP_2112
Bifunctional xylanase/esterase.
     
 0.506
MYP_3206
Mannan endo-1,4-beta-mannosidase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
     
 0.506
MYP_3614
Bifunctional xylanase/esterase.
     
 0.506
MYP_4347
Glycoside hydrolase.
     
 0.506
MYP_3005
DNA primase.
  
     0.499
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.