Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MYP_1908Aldo/keto reductase. (323 aa)    
Predicted Functional Partners:
MYP_1907
Transporter.
 
     0.761
pdxH
Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).
     
  0.672
MYP_748
Hypothetical protein.
   
  0.598
MYP_3779
Hypothetical protein.
   
 0.581
MYP_472
Hypothetical protein Slin_3024.
  
     0.550
MYP_1905
Oxidoreductase-dehydrogenase.
  
 
  0.527
MYP_2928
Hypothetical protein.
 
  
 0.490
MYP_1769
Neutral/alkaline non-lysosomal ceramidase.
  
     0.481
MYP_400
Non-ribosomal peptide synthetase module containing protein.
   
 0.470
MYP_1909
B-glucosidase.
       0.448
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
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