STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYP_1909B-glucosidase. (699 aa)    
Predicted Functional Partners:
MYP_3104
Alpha-glucosidase.
  
 0.807
MYP_3507
Hypothetical protein.
    
 0.697
MYP_4151
Glycoside hydrolase family 16.
  
  
  0.682
MYP_1298
Beta-lactamase.
  
 
  0.663
MYP_4349
Beta-glucanase.
 
  
  0.658
MYP_2015
Beta-galactosidase.
    
 0.652
MYP_3454
Glycoside hydrolase family protein.
  
  
  0.596
MYP_3206
Mannan endo-1,4-beta-mannosidase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
  
 0.574
MYP_2112
Bifunctional xylanase/esterase.
  
  
 0.569
MYP_331
Glycosyl hydrolase; Belongs to the glycosyl hydrolase 31 family.
 
  
 0.559
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
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