STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYP_1938Hypothetical protein. (264 aa)    
Predicted Functional Partners:
MYP_1939
Mannosidase-related.
 
  
  0.660
MYP_1937
Hypothetical protein.
 
     0.656
MYP_4711
Hypothetical protein Fluta_3350.
  
     0.563
MYP_2720
Hypothetical protein.
  
     0.559
MYP_2634
Hypothetical protein CHU_3437.
  
  
  0.558
MYP_1936
Hypothetical protein.
 
     0.555
MYP_2947
Internalin-like protein.
  
     0.533
MYP_2073
LRR-like protein.
  
     0.522
MYP_2111
Xylanase; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
  
     0.521
MYP_2760
Hypothetical protein.
  
     0.506
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.