Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
MYP_1488 | MYP_163 | Hypothetical protein. | PAS domain-containing protein. | 0.999 |
MYP_1488 | MYP_1706 | Hypothetical protein. | Hypothetical protein. | 0.999 |
MYP_1488 | MYP_175 | Hypothetical protein. | Signal transduction histidine kinase. | 0.999 |
MYP_1488 | MYP_1947 | Hypothetical protein. | Hypothetical protein. | 0.979 |
MYP_1488 | MYP_1948 | Hypothetical protein. | Putative hybrid histidine kinase. | 0.999 |
MYP_1488 | MYP_289 | Hypothetical protein. | GAF sensor hybrid histidine kinase. | 0.999 |
MYP_1488 | MYP_3865 | Hypothetical protein. | Hypothetical protein SCE1572_31285. | 0.999 |
MYP_1488 | MYP_3945 | Hypothetical protein. | Multi-sensor hybrid histidine kinase. | 0.999 |
MYP_1488 | MYP_485 | Hypothetical protein. | Multi-sensor hybrid histidine kinase. | 0.999 |
MYP_1488 | MYP_987 | Hypothetical protein. | Hypothetical protein. | 0.999 |
MYP_163 | MYP_1488 | PAS domain-containing protein. | Hypothetical protein. | 0.999 |
MYP_163 | MYP_1706 | PAS domain-containing protein. | Hypothetical protein. | 0.999 |
MYP_163 | MYP_175 | PAS domain-containing protein. | Signal transduction histidine kinase. | 0.999 |
MYP_163 | MYP_1947 | PAS domain-containing protein. | Hypothetical protein. | 0.928 |
MYP_163 | MYP_1948 | PAS domain-containing protein. | Putative hybrid histidine kinase. | 0.999 |
MYP_163 | MYP_289 | PAS domain-containing protein. | GAF sensor hybrid histidine kinase. | 0.999 |
MYP_163 | MYP_3865 | PAS domain-containing protein. | Hypothetical protein SCE1572_31285. | 0.999 |
MYP_163 | MYP_3945 | PAS domain-containing protein. | Multi-sensor hybrid histidine kinase. | 0.999 |
MYP_163 | MYP_485 | PAS domain-containing protein. | Multi-sensor hybrid histidine kinase. | 0.999 |
MYP_163 | MYP_987 | PAS domain-containing protein. | Hypothetical protein. | 0.999 |
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