STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYP_198Hypothetical protein CHU_3473. (522 aa)    
Predicted Functional Partners:
ribBA
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.702
MYP_289
GAF sensor hybrid histidine kinase.
    
 0.584
MYP_1167
Argininosuccinate lyase.
  
     0.580
MYP_1177
Hypothetical protein CHU_3079.
  
     0.562
MYP_1613
Hypothetical protein CHU_0779.
  
     0.535
MYP_1170
Acetylornithine deacetylase.
  
     0.509
MYP_4177
Hypothetical protein.
  
  
  0.501
MYP_153
Molybdopterin-guanine dinucleotide biosynthesis protein MoaC.
    
 0.481
MYP_2052
Hypothetical protein.
  
  
  0.467
MYP_470
Alpha-glucan phosphorylase.
  
  
  0.466
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.