Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MYP_2004Putative periplasmic ligand-binding sensor domain protein. (582 aa)    
Predicted Functional Partners:
MYP_4884
Methyl-accepting chemotaxis protein.
 
  
  0.976
MYP_4870
Ribose and galactose chemoreceptor protein.
 
   
  0.919
MYP_289
GAF sensor hybrid histidine kinase.
 
  
 
0.871
MYP_175
Signal transduction histidine kinase.
 
  
 
0.865
MYP_3945
Multi-sensor hybrid histidine kinase.
  
  0.847
MYP_2609
Phytochrome-like protein cph1.
 
  
  0.841
MYP_3664
Signal transduction histidine kinase.
 
  
  0.838
MYP_1614
Hypothetical protein.
    
  0.823
MYP_353
Hypothetical protein.
 
 
 0.817
MYP_1488
Hypothetical protein.
 
  
  0.794
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
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