STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYP_205Alkyl hydroperoxide reductase. (185 aa)    
Predicted Functional Partners:
MYP_204
nUDIX hydrolase.
       0.773
MYP_2236
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
  0.678
pgk
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
 
      0.656
MYP_203
Two-component system sensor histidine kinase.
       0.581
MYP_206
FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
       0.552
MYP_207
Hypothetical protein.
       0.552
MYP_208
Hypothetical protein; Belongs to the glycerate kinase type-1 family.
       0.548
MYP_202
DeoR family transcriptional regulator.
       0.423
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.