STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYP_2112Bifunctional xylanase/esterase. (767 aa)    
Predicted Functional Partners:
MYP_2756
Chitosanase-glucanase; Belongs to the glycosyl hydrolase 8 (cellulase D) family.
 
  
 0.853
MYP_3325
Beta-glycosidase-like protein.
  
   
 0.853
MYP_2156
Beta-glycosidase-like protein.
  
   
 0.848
MYP_327
Endoglucanase.
  
  
 0.821
MYP_4968
Endoglucanase.
  
  
 0.821
MYP_1436
Hypothetical protein.
  
  
 0.817
MYP_4095
FG-GAP repeat-containing protein.
  
  
 0.798
MYP_4094
FG-GAP repeat-containing protein.
  
  
 0.796
MYP_3331
Xylanase.
   
 0.788
MYP_2166
Multifunctional acetylxylan esterase/b-xylosidase/a-L-arabinofuranosidase and carbohydrate esterase family 6 protein.
 
  
 0.782
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
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