STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYP_2129Hypothetical protein. (173 aa)    
Predicted Functional Partners:
MYP_2128
Putative molecular chaperone.
       0.797
MYP_1659
Hypothetical protein.
  
     0.774
MYP_954
Hypothetical protein MED152_05055.
  
     0.767
MYP_2315
GldC protein.
  
     0.766
MYP_5001
acyl-CoA reductase.
  
     0.684
bshC
UPF0747 protein; Belongs to the BshC family.
  
     0.675
MYP_11
Hypothetical protein.
  
     0.670
MYP_703
Hypothetical protein Dfer_1239.
  
     0.614
MYP_46
ATP-dependent Clp protease adaptor protein ClpS; Belongs to the ClpS family.
  
     0.611
MYP_3075
Hypothetical protein.
  
     0.559
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.