Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
MYP_1450 | MYP_1614 | Hypothetical protein. | Hypothetical protein. | 0.619 |
MYP_1450 | MYP_2219 | Hypothetical protein. | Hypothetical protein Hsw_0429. | 0.800 |
MYP_1450 | MYP_2609 | Hypothetical protein. | Phytochrome-like protein cph1. | 0.614 |
MYP_1450 | MYP_289 | Hypothetical protein. | GAF sensor hybrid histidine kinase. | 0.887 |
MYP_1450 | MYP_3490 | Hypothetical protein. | Hypothetical protein. | 0.420 |
MYP_1450 | MYP_4868 | Hypothetical protein. | Chemotaxis protein CheA. | 0.670 |
MYP_1450 | MYP_4888 | Hypothetical protein. | Chemotaxis protein CheA. | 0.670 |
MYP_1614 | MYP_1450 | Hypothetical protein. | Hypothetical protein. | 0.619 |
MYP_1614 | MYP_2219 | Hypothetical protein. | Hypothetical protein Hsw_0429. | 0.882 |
MYP_1614 | MYP_2609 | Hypothetical protein. | Phytochrome-like protein cph1. | 0.991 |
MYP_1614 | MYP_289 | Hypothetical protein. | GAF sensor hybrid histidine kinase. | 0.999 |
MYP_1614 | MYP_3490 | Hypothetical protein. | Hypothetical protein. | 0.619 |
MYP_1614 | MYP_4848 | Hypothetical protein. | Hypothetical protein. | 0.619 |
MYP_1614 | MYP_4851 | Hypothetical protein. | Hypothetical protein. | 0.619 |
MYP_1614 | MYP_4868 | Hypothetical protein. | Chemotaxis protein CheA. | 0.996 |
MYP_1614 | MYP_4888 | Hypothetical protein. | Chemotaxis protein CheA. | 0.996 |
MYP_2219 | MYP_1450 | Hypothetical protein Hsw_0429. | Hypothetical protein. | 0.800 |
MYP_2219 | MYP_1614 | Hypothetical protein Hsw_0429. | Hypothetical protein. | 0.882 |
MYP_2219 | MYP_2220 | Hypothetical protein Hsw_0429. | Hypothetical protein. | 0.942 |
MYP_2219 | MYP_2609 | Hypothetical protein Hsw_0429. | Phytochrome-like protein cph1. | 0.876 |
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