Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MYP_2236 | MYP_2237 | MYP_2236 | MYP_2237 | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Hypothetical protein. | 0.568 |
MYP_2236 | MYP_2238 | MYP_2236 | MYP_2238 | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Phosphatase GppA. | 0.402 |
MYP_2236 | MYP_4492 | MYP_2236 | MYP_4492 | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Metal dependent phosphohydrolase. | 0.746 |
MYP_2236 | MYP_4640 | MYP_2236 | MYP_4640 | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | MFS transporter; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.746 |
MYP_2237 | MYP_2236 | MYP_2237 | MYP_2236 | Hypothetical protein. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.568 |
MYP_2237 | MYP_2238 | MYP_2237 | MYP_2238 | Hypothetical protein. | Phosphatase GppA. | 0.438 |
MYP_2238 | MYP_2236 | MYP_2238 | MYP_2236 | Phosphatase GppA. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.402 |
MYP_2238 | MYP_2237 | MYP_2238 | MYP_2237 | Phosphatase GppA. | Hypothetical protein. | 0.438 |
MYP_2238 | MYP_4492 | MYP_2238 | MYP_4492 | Phosphatase GppA. | Metal dependent phosphohydrolase. | 0.831 |
MYP_2238 | MYP_4640 | MYP_2238 | MYP_4640 | Phosphatase GppA. | MFS transporter; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.900 |
MYP_2238 | MYP_4776 | MYP_2238 | MYP_4776 | Phosphatase GppA. | Ppx/GppA phosphatase. | 0.907 |
MYP_2238 | MYP_576 | MYP_2238 | MYP_576 | Phosphatase GppA. | Polyphosphate kinase. | 0.562 |
MYP_2238 | ppk | MYP_2238 | MYP_2241 | Phosphatase GppA. | Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. | 0.922 |
MYP_4492 | MYP_2236 | MYP_4492 | MYP_2236 | Metal dependent phosphohydrolase. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.746 |
MYP_4492 | MYP_2238 | MYP_4492 | MYP_2238 | Metal dependent phosphohydrolase. | Phosphatase GppA. | 0.831 |
MYP_4492 | MYP_4640 | MYP_4492 | MYP_4640 | Metal dependent phosphohydrolase. | MFS transporter; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.901 |
MYP_4492 | MYP_4776 | MYP_4492 | MYP_4776 | Metal dependent phosphohydrolase. | Ppx/GppA phosphatase. | 0.831 |
MYP_4640 | MYP_2236 | MYP_4640 | MYP_2236 | MFS transporter; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.746 |
MYP_4640 | MYP_2238 | MYP_4640 | MYP_2238 | MFS transporter; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | Phosphatase GppA. | 0.900 |
MYP_4640 | MYP_4492 | MYP_4640 | MYP_4492 | MFS transporter; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | Metal dependent phosphohydrolase. | 0.901 |
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