Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
MYP_1203 | MYP_2285 | Hypothetical protein. | Hypothetical protein. | 0.429 |
MYP_1522 | MYP_2285 | TonB-dependent siderophore receptor. | Hypothetical protein. | 0.443 |
MYP_2284 | MYP_2285 | Hypothetical protein Dfer_3179. | Hypothetical protein. | 0.429 |
MYP_2284 | MYP_2286 | Hypothetical protein Dfer_3179. | Iduronate-2-sulfatase. | 0.724 |
MYP_2284 | MYP_2287 | Hypothetical protein Dfer_3179. | Hypothetical protein. | 0.643 |
MYP_2285 | MYP_1203 | Hypothetical protein. | Hypothetical protein. | 0.429 |
MYP_2285 | MYP_1522 | Hypothetical protein. | TonB-dependent siderophore receptor. | 0.443 |
MYP_2285 | MYP_2284 | Hypothetical protein. | Hypothetical protein Dfer_3179. | 0.429 |
MYP_2285 | MYP_2286 | Hypothetical protein. | Iduronate-2-sulfatase. | 0.773 |
MYP_2285 | MYP_2287 | Hypothetical protein. | Hypothetical protein. | 0.586 |
MYP_2285 | MYP_2288 | Hypothetical protein. | Sulfurtransferase. | 0.602 |
MYP_2285 | MYP_2289 | Hypothetical protein. | Hypothetical protein. | 0.482 |
MYP_2285 | MYP_2291 | Hypothetical protein. | Carbohydrate-binding protein SusD. | 0.635 |
MYP_2285 | MYP_2292 | Hypothetical protein. | TonB-denpendent receptor. | 0.486 |
MYP_2285 | MYP_4956 | Hypothetical protein. | Rieske (2Fe-2S) domain-containing protein. | 0.512 |
MYP_2286 | MYP_2284 | Iduronate-2-sulfatase. | Hypothetical protein Dfer_3179. | 0.724 |
MYP_2286 | MYP_2285 | Iduronate-2-sulfatase. | Hypothetical protein. | 0.773 |
MYP_2286 | MYP_2287 | Iduronate-2-sulfatase. | Hypothetical protein. | 0.638 |
MYP_2286 | MYP_2288 | Iduronate-2-sulfatase. | Sulfurtransferase. | 0.564 |
MYP_2286 | MYP_2289 | Iduronate-2-sulfatase. | Hypothetical protein. | 0.697 |
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