Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MYP_1323 | MYP_2306 | MYP_1323 | MYP_2306 | Hypothetical protein. | Heat shock and oxidative stress RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily. | 0.547 |
MYP_1323 | MYP_4388 | MYP_1323 | MYP_4388 | Hypothetical protein. | Hypothetical protein. | 0.540 |
MYP_1323 | MYP_4407 | MYP_1323 | MYP_4407 | Hypothetical protein. | Hypothetical protein. | 0.669 |
MYP_2245 | MYP_2306 | MYP_2245 | MYP_2306 | Hypothetical protein CHU_1410. | Heat shock and oxidative stress RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily. | 0.607 |
MYP_2245 | MYP_4388 | MYP_2245 | MYP_4388 | Hypothetical protein CHU_1410. | Hypothetical protein. | 0.559 |
MYP_2245 | MYP_4407 | MYP_2245 | MYP_4407 | Hypothetical protein CHU_1410. | Hypothetical protein. | 0.747 |
MYP_2245 | MYP_505 | MYP_2245 | MYP_505 | Hypothetical protein CHU_1410. | Hypothetical protein. | 0.782 |
MYP_2306 | MYP_1323 | MYP_2306 | MYP_1323 | Heat shock and oxidative stress RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily. | Hypothetical protein. | 0.547 |
MYP_2306 | MYP_2245 | MYP_2306 | MYP_2245 | Heat shock and oxidative stress RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily. | Hypothetical protein CHU_1410. | 0.607 |
MYP_2306 | MYP_2307 | MYP_2306 | MYP_2307 | Heat shock and oxidative stress RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily. | Hypothetical protein. | 0.789 |
MYP_2306 | MYP_2392 | MYP_2306 | MYP_2392 | Heat shock and oxidative stress RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily. | Hypothetical protein. | 0.580 |
MYP_2306 | MYP_4388 | MYP_2306 | MYP_4388 | Heat shock and oxidative stress RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily. | Hypothetical protein. | 0.572 |
MYP_2306 | MYP_4407 | MYP_2306 | MYP_4407 | Heat shock and oxidative stress RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily. | Hypothetical protein. | 0.702 |
MYP_2306 | MYP_483 | MYP_2306 | MYP_483 | Heat shock and oxidative stress RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily. | Hypothetical protein Ftrac_0832. | 0.579 |
MYP_2306 | MYP_505 | MYP_2306 | MYP_505 | Heat shock and oxidative stress RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily. | Hypothetical protein. | 0.557 |
MYP_2306 | rpoB | MYP_2306 | MYP_4171 | Heat shock and oxidative stress RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.556 |
MYP_2306 | rpoC | MYP_2306 | MYP_4172 | Heat shock and oxidative stress RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.592 |
MYP_2307 | MYP_2306 | MYP_2307 | MYP_2306 | Hypothetical protein. | Heat shock and oxidative stress RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily. | 0.789 |
MYP_2392 | MYP_2306 | MYP_2392 | MYP_2306 | Hypothetical protein. | Heat shock and oxidative stress RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily. | 0.580 |
MYP_2392 | MYP_4388 | MYP_2392 | MYP_4388 | Hypothetical protein. | Hypothetical protein. | 0.573 |
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