STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYP_2388Hypothetical protein BAV2031. (121 aa)    
Predicted Functional Partners:
MYP_1828
Aminotransferase class V.
  
 
 0.917
MYP_2389
Hypothetical protein; Belongs to the globin family.
 
   
 0.913
MYP_3145
Bifunctional cbb3-type cytochrome C oxidase subunit I/II; Belongs to the heme-copper respiratory oxidase family.
  
    0.681
MYP_3485
Nitric oxide dioxygenase.
 
   
 0.545
MYP_4579
Sulfur carrier protein adenylyltransferase ThiF.
    
  0.496
MYP_3779
Hypothetical protein.
   
 
 0.437
MYP_2387
Hypothetical protein Fluta_3188.
       0.430
MYP_398
Beta-ketoacyl synthase.
   
 
 0.425
MYP_400
Non-ribosomal peptide synthetase module containing protein.
   
 
 0.416
MYP_4665
Arsenate reductase; Belongs to the ArsC family.
  
  
 0.412
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
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