Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MYP_2299 | MYP_2598 | MYP_2299 | MYP_2598 | Alpha-amylase family protein. | N-acetylglucosamine kinase. | 0.721 |
MYP_2299 | MYP_331 | MYP_2299 | MYP_331 | Alpha-amylase family protein. | Glycosyl hydrolase; Belongs to the glycosyl hydrolase 31 family. | 0.746 |
MYP_2299 | pgi | MYP_2299 | MYP_4121 | Alpha-amylase family protein. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.403 |
MYP_2449 | MYP_2598 | MYP_2449 | MYP_2598 | Glucosamine-6-phosphate deaminase. | N-acetylglucosamine kinase. | 0.903 |
MYP_2449 | MYP_4118 | MYP_2449 | MYP_4118 | Glucosamine-6-phosphate deaminase. | Mannose-6-phosphate isomerase. | 0.904 |
MYP_2449 | MYP_773 | MYP_2449 | MYP_773 | Glucosamine-6-phosphate deaminase. | Phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. | 0.573 |
MYP_2449 | glmS | MYP_2449 | MYP_2034 | Glucosamine-6-phosphate deaminase. | Glucosamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.900 |
MYP_2449 | pfkA | MYP_2449 | MYP_488 | Glucosamine-6-phosphate deaminase. | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. | 0.569 |
MYP_2449 | pgi | MYP_2449 | MYP_4121 | Glucosamine-6-phosphate deaminase. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.920 |
MYP_2598 | MYP_2299 | MYP_2598 | MYP_2299 | N-acetylglucosamine kinase. | Alpha-amylase family protein. | 0.721 |
MYP_2598 | MYP_2449 | MYP_2598 | MYP_2449 | N-acetylglucosamine kinase. | Glucosamine-6-phosphate deaminase. | 0.903 |
MYP_2598 | MYP_331 | MYP_2598 | MYP_331 | N-acetylglucosamine kinase. | Glycosyl hydrolase; Belongs to the glycosyl hydrolase 31 family. | 0.766 |
MYP_2598 | MYP_4118 | MYP_2598 | MYP_4118 | N-acetylglucosamine kinase. | Mannose-6-phosphate isomerase. | 0.990 |
MYP_2598 | MYP_4610 | MYP_2598 | MYP_4610 | N-acetylglucosamine kinase. | Hypothetical protein; Belongs to the glycosyl hydrolase 26 family. | 0.878 |
MYP_2598 | MYP_773 | MYP_2598 | MYP_773 | N-acetylglucosamine kinase. | Phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. | 0.914 |
MYP_2598 | dapA | MYP_2598 | MYP_4692 | N-acetylglucosamine kinase. | Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.746 |
MYP_2598 | glmS | MYP_2598 | MYP_2034 | N-acetylglucosamine kinase. | Glucosamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.898 |
MYP_2598 | pfkA | MYP_2598 | MYP_488 | N-acetylglucosamine kinase. | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. | 0.906 |
MYP_2598 | pgi | MYP_2598 | MYP_4121 | N-acetylglucosamine kinase. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.907 |
MYP_331 | MYP_2299 | MYP_331 | MYP_2299 | Glycosyl hydrolase; Belongs to the glycosyl hydrolase 31 family. | Alpha-amylase family protein. | 0.746 |
page 1 of 3