STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYP_2610Hypothetical protein. (505 aa)    
Predicted Functional Partners:
MYP_3945
Multi-sensor hybrid histidine kinase.
  
 0.980
MYP_3664
Signal transduction histidine kinase.
  
 0.978
MYP_289
GAF sensor hybrid histidine kinase.
 
 
 0.969
MYP_2609
Phytochrome-like protein cph1.
 
  
  0.951
MYP_290
Response regulator receiver sensor signal transduction histidine kinase.
 
 
  0.937
MYP_3533
Phytochrome-like protein cph1.
 
 
  0.928
MYP_354
PAS/PAC sensor signal transduction histidine kinase.
   
  0.927
MYP_2611
Heme oxygenase.
 
   
 0.926
MYP_485
Multi-sensor hybrid histidine kinase.
  
 0.924
MYP_1488
Hypothetical protein.
 
 
 0.914
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.