STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYP_2641Thioredoxin reductase. (317 aa)    
Predicted Functional Partners:
MYP_4145
Thioredoxin; Belongs to the thioredoxin family.
 
 0.979
MYP_2908
Thioredoxin; Belongs to the thioredoxin family.
 
 0.978
MYP_3708
Cystathionine beta-lyase/cystathionine gamma-synthase.
   
 
 0.859
MYP_775
Thioredoxin domain-containing protein.
   
 0.834
MYP_613
Hypothetical protein; Belongs to the thioredoxin family.
  
 0.809
MYP_2642
M24/M37 family peptidase.
       0.797
MYP_1856
Glutamate synthase (NADH) large subunit.
    
 0.778
MYP_2288
Sulfurtransferase.
 
 
 0.771
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
 0.736
MYP_2275
Aminotransferase class 5 protein; selenocysteine lyase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
  
 
  0.732
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
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