STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYP_2877Type II general secretion pathway GSP G protein. (139 aa)    
Predicted Functional Partners:
MYP_2879
Type II secretory pathway.
 
 0.993
MYP_2889
Type II secretory pathway.
 
  
 0.968
MYP_2880
Type II general secretion pathway GSP D protein; Belongs to the bacterial secretin family.
 
  
 0.956
MYP_2883
Hypothetical protein Solca_1593.
 
     0.951
MYP_2885
Hypothetical protein Solca_1595.
 
     0.939
MYP_2881
Hypothetical protein Solca_1567.
     
 0.804
MYP_2878
Hypothetical protein.
       0.793
MYP_2882
Hypothetical protein CHU_3193.
     
 0.786
MYP_2884
Hypothetical protein Solca_1594.
     
 0.786
MYP_1916
Hypothetical protein CHU_1253.
  
   
 0.651
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.