STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYP_2916Hypothetical protein. (166 aa)    
Predicted Functional Partners:
MYP_1043
Helix-turn-helix domain-containing protein.
  
     0.616
MYP_2917
Hypothetical protein.
       0.556
MYP_3989
PKD domain-containing protein.
  
     0.550
MYP_1937
Hypothetical protein.
  
     0.477
MYP_3624
Hypothetical protein CHU_1521.
  
     0.453
MYP_2624
Hypothetical protein CHU_1671.
  
     0.452
MYP_4078
RHS repeat-associated core domain-containing protein.
  
     0.452
MYP_2050
Hypothetical protein.
  
     0.446
MYP_3848
Hypothetical protein.
  
     0.444
MYP_5026
RHS repeat-associated core domain-containing protein.
  
     0.440
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.