STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYP_298Chemotaxis protein CheY. (170 aa)    
Predicted Functional Partners:
MYP_297
Hypothetical protein.
 
  0.971
MYP_289
GAF sensor hybrid histidine kinase.
  
 0.949
MYP_299
Phosphoglycerate transport protein.
 
  0.934
MYP_163
PAS domain-containing protein.
 
 0.910
MYP_3865
Hypothetical protein SCE1572_31285.
  
 0.894
MYP_1614
Hypothetical protein.
  
 0.890
MYP_175
Signal transduction histidine kinase.
 
 0.879
MYP_2609
Phytochrome-like protein cph1.
  
 
 0.865
MYP_1706
Hypothetical protein.
 
 0.861
MYP_3945
Multi-sensor hybrid histidine kinase.
 
 0.854
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.