STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYP_305Hypothetical protein. (223 aa)    
Predicted Functional Partners:
MYP_2060
Hypothetical protein.
    
 0.907
MYP_306
Hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.
       0.804
MYP_59
Hypothetical protein.
 
     0.793
MYP_4762
Hypothetical protein.
 
     0.792
MYP_537
Hypothetical protein.
 
     0.792
MYP_3388
Hypothetical protein.
 
     0.783
MYP_1663
Hypothetical protein CHU_3499.
 
     0.781
MYP_307
RNA helicase; Belongs to the DEAD box helicase family.
       0.773
MYP_1669
Hypothetical protein.
  
     0.770
MYP_2154
Fatty acid hydroxylase.
   
 0.718
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.