STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYP_3072Hypothetical protein Runsl_4500. (116 aa)    
Predicted Functional Partners:
MYP_1969
Hypothetical protein.
  
     0.653
MYP_4742
Cytochrome oxidase subunit III.
 
     0.626
MYP_2304
Transcriptional regulator.
  
     0.620
MYP_3073
AraC family transcriptional regulator.
 
     0.613
MYP_3075
Hypothetical protein.
 
     0.610
MYP_975
Hypothetical protein.
  
     0.567
MYP_2910
Hypothetical protein Ftrac_3343.
  
     0.539
MYP_1309
Hypothetical protein Hsw_3408.
  
     0.516
MYP_954
Hypothetical protein MED152_05055.
  
     0.514
MYP_3077
Hypothetical protein.
  
     0.503
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.