STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYP_3191Major facilitator transporter. (529 aa)    
Predicted Functional Partners:
MYP_4752
Molybdopterin oxidoreductase.
     
 0.625
MYP_3779
Hypothetical protein.
 
  
 0.618
MYP_400
Non-ribosomal peptide synthetase module containing protein.
    
 0.584
MYP_3192
Hypothetical protein.
       0.523
MYP_144
Nitrate reductase, nitrite reductase (NAD(P)H); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
     
 0.517
MYP_3887
Nitrate reductase/nitrite reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
     
 0.517
MYP_1192
Cystathionine beta-synthase.
     
 0.454
MYP_289
GAF sensor hybrid histidine kinase.
  
   
 0.420
MYP_2742
Hypothetical protein Phep_2500.
  
  
  0.413
MYP_2813
Short-chain dehydrogenase/reductase SDR.
  
     0.411
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
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