STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYP_3315Glyoxalase/bleomycin resistance protein/dioxygenase. (126 aa)    
Predicted Functional Partners:
MYP_4199
methylmalonyl-CoA mutase.
     
 0.769
MYP_3779
Hypothetical protein.
  
 
 0.744
MYP_1400
Diguanylate cyclase.
  
  
  0.687
MYP_2857
4-oxalocrotonate tautomerase family protein.
    
 0.623
MYP_286
Hypothetical protein.
     
 0.618
MYP_4969
Monoamine oxidase.
  
  
  0.605
MYP_1216
Hypothetical protein CHU_0524.
    
  0.593
MYP_3504
Hypothetical protein sce1309.
    
 0.566
MYP_3485
Nitric oxide dioxygenase.
    
  0.517
MYP_2590
Hypothetical protein.
    
  0.495
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.