STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYP_3388Hypothetical protein. (578 aa)    
Predicted Functional Partners:
MYP_1807
Magnesium chelatase subunit ChlI.
  
 0.957
MYP_3389
Dihydroorotase.
       0.793
MYP_3391
B-glycosyltransferase.
       0.793
MYP_3390
Glycosyl transferase family 2.
       0.786
MYP_59
Hypothetical protein.
 
     0.786
MYP_305
Hypothetical protein.
 
     0.783
MYP_4762
Hypothetical protein.
 
  
 0.778
MYP_1663
Hypothetical protein CHU_3499.
  
     0.775
MYP_1669
Hypothetical protein.
  
     0.775
MYP_537
Hypothetical protein.
  
     0.773
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.