STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYP_3458Hypothetical protein. (394 aa)    
Predicted Functional Partners:
MYP_3457
Hypothetical protein.
 
     0.929
MYP_700
Hypothetical protein; Belongs to the 'phage' integrase family.
  
     0.582
MYP_628
Hypothetical protein; Belongs to the 'phage' integrase family.
  
     0.549
MYP_2147
Caax amino terminal protease family.
  
     0.535
MYP_2099
Hypothetical protein.
  
     0.528
MYP_3456
Transposase.
       0.477
MYP_1769
Neutral/alkaline non-lysosomal ceramidase.
  
     0.475
MYP_472
Hypothetical protein Slin_3024.
  
     0.459
MYP_2369
Hypothetical protein.
  
     0.453
MYP_1010
Hypothetical protein.
  
     0.425
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.