STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYP_382Hypothetical protein. (492 aa)    
Predicted Functional Partners:
MYP_2282
Hypothetical protein.
  
  
  0.831
MYP_2280
Sulfatase.
  
  
  0.827
MYP_2283
Hypothetical protein.
  
     0.771
MYP_2293
Hypothetical protein.
  
     0.769
MYP_2294
Hypothetical protein.
  
     0.767
MYP_4880
Hypothetical protein.
  
     0.725
MYP_2284
Hypothetical protein Dfer_3179.
  
 
   0.531
MYP_3845
Gliding motility-associated lipoprotein GldK.
  
 
   0.513
MYP_935
Gliding motility-like protein.
  
 
   0.455
MYP_383
Transporter.
       0.418
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.