STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYP_3926Transporter. (452 aa)    
Predicted Functional Partners:
MYP_2595
RND transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.886
MYP_2596
Acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
  0.886
MYP_3927
Putative glycosyl transferase, family 2.
       0.648
MYP_3667
Hypothetical protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   
  0.633
MYP_3931
Putative hemolysin secretion transport system membrane protein.
  
  0.612
MYP_1619
RND transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   
  0.607
MYP_418
Hypothetical protein Solca_2544.
  
  0.600
MYP_4437
Putative Co/Zn/Cd efflux system membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   
  0.572
MYP_816
Hypothetical protein CHU_1145; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   
  0.572
MYP_1519
Hemolysin D family transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   
  0.548
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
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