Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
MYP_1200 | MYP_2829 | ATPase. | Hypothetical protein Solca_3587. | 0.774 |
MYP_1200 | MYP_3357 | ATPase. | Hypothetical protein. | 0.602 |
MYP_1200 | MYP_3948 | ATPase. | ArsR family transcriptional regulator. | 0.419 |
MYP_2829 | MYP_1200 | Hypothetical protein Solca_3587. | ATPase. | 0.774 |
MYP_2829 | MYP_3948 | Hypothetical protein Solca_3587. | ArsR family transcriptional regulator. | 0.474 |
MYP_3357 | MYP_1200 | Hypothetical protein. | ATPase. | 0.602 |
MYP_3357 | MYP_3948 | Hypothetical protein. | ArsR family transcriptional regulator. | 0.615 |
MYP_3947 | MYP_3948 | Hypothetical protein. | ArsR family transcriptional regulator. | 0.426 |
MYP_3947 | MYP_3949 | Hypothetical protein. | Activator of Hsp90 ATPase 1 family protein. | 0.426 |
MYP_3948 | MYP_1200 | ArsR family transcriptional regulator. | ATPase. | 0.419 |
MYP_3948 | MYP_2829 | ArsR family transcriptional regulator. | Hypothetical protein Solca_3587. | 0.474 |
MYP_3948 | MYP_3357 | ArsR family transcriptional regulator. | Hypothetical protein. | 0.615 |
MYP_3948 | MYP_3947 | ArsR family transcriptional regulator. | Hypothetical protein. | 0.426 |
MYP_3948 | MYP_3949 | ArsR family transcriptional regulator. | Activator of Hsp90 ATPase 1 family protein. | 0.888 |
MYP_3948 | MYP_3950 | ArsR family transcriptional regulator. | Membrane protein. | 0.538 |
MYP_3949 | MYP_3947 | Activator of Hsp90 ATPase 1 family protein. | Hypothetical protein. | 0.426 |
MYP_3949 | MYP_3948 | Activator of Hsp90 ATPase 1 family protein. | ArsR family transcriptional regulator. | 0.888 |
MYP_3949 | MYP_3950 | Activator of Hsp90 ATPase 1 family protein. | Membrane protein. | 0.473 |
MYP_3950 | MYP_3948 | Membrane protein. | ArsR family transcriptional regulator. | 0.538 |
MYP_3950 | MYP_3949 | Membrane protein. | Activator of Hsp90 ATPase 1 family protein. | 0.473 |