STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYP_4032TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. (276 aa)    
Predicted Functional Partners:
MYP_4140
Hypothetical protein.
 
 
 0.987
MYP_4033
Hypothetical protein Hsw_0356.
 
 
 0.965
MYP_4034
Biopolymer transporter.
 
 
 0.954
MYP_4035
Flagellar motor protein MotA.
 
 
 0.949
MYP_4006
Biopolymer transporter ExbB.
  
 
 0.787
MYP_2914
OmpA family outer membrane protein.
 
 
 
 0.751
MYP_2613
Hypothetical protein.
 
 
 
 0.747
MYP_4025
Hypothetical protein.
 
 
 
 0.741
MYP_2132
Hypothetical protein.
 
 
 
 0.725
MYP_1360
OmpA family peptidoglycan-associated lipoprotein.
 
 
 
 0.718
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.