STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYP_4118Mannose-6-phosphate isomerase. (325 aa)    
Predicted Functional Partners:
MYP_2598
N-acetylglucosamine kinase.
 
 
 0.990
MYP_2015
Beta-galactosidase.
  
 0.964
MYP_773
Phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.916
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.908
MYP_2449
Glucosamine-6-phosphate deaminase.
  
  
 0.904
pfkA
6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
  
  
 0.904
MYP_4540
Mannose-1-phosphate guanylyltransferase.
   
 0.898
MYP_1829
Phosphoglucosamine mutase.
  
 
 0.896
glmS
Glucosamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
     
 0.892
MYP_2253
Phosphoglucomutase.
 
 
 0.714
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
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