Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
MYP_1185 | MYP_1466 | Endoglucanase-like protein. | Na-Ca exchanger/integrin-beta4. | 0.529 |
MYP_1185 | MYP_1601 | Endoglucanase-like protein. | Peptidase S8/S53 subtilisin kexin sedolisin. | 0.529 |
MYP_1185 | MYP_1753 | Endoglucanase-like protein. | Retaining beta-glycosidase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | 0.798 |
MYP_1185 | MYP_3627 | Endoglucanase-like protein. | Rhs family-like protein. | 0.791 |
MYP_1185 | MYP_3688 | Endoglucanase-like protein. | Hypothetical protein. | 0.494 |
MYP_1185 | MYP_3786 | Endoglucanase-like protein. | Hypothetical protein. | 0.805 |
MYP_1185 | MYP_4127 | Endoglucanase-like protein. | Hypothetical protein. | 0.542 |
MYP_1466 | MYP_1185 | Na-Ca exchanger/integrin-beta4. | Endoglucanase-like protein. | 0.529 |
MYP_1466 | MYP_1601 | Na-Ca exchanger/integrin-beta4. | Peptidase S8/S53 subtilisin kexin sedolisin. | 0.441 |
MYP_1466 | MYP_1796 | Na-Ca exchanger/integrin-beta4. | Endoglucanase-like protein. | 0.529 |
MYP_1466 | MYP_3688 | Na-Ca exchanger/integrin-beta4. | Hypothetical protein. | 0.661 |
MYP_1466 | MYP_4127 | Na-Ca exchanger/integrin-beta4. | Hypothetical protein. | 0.529 |
MYP_1601 | MYP_1185 | Peptidase S8/S53 subtilisin kexin sedolisin. | Endoglucanase-like protein. | 0.529 |
MYP_1601 | MYP_1466 | Peptidase S8/S53 subtilisin kexin sedolisin. | Na-Ca exchanger/integrin-beta4. | 0.441 |
MYP_1601 | MYP_1796 | Peptidase S8/S53 subtilisin kexin sedolisin. | Endoglucanase-like protein. | 0.529 |
MYP_1601 | MYP_3688 | Peptidase S8/S53 subtilisin kexin sedolisin. | Hypothetical protein. | 0.661 |
MYP_1601 | MYP_4127 | Peptidase S8/S53 subtilisin kexin sedolisin. | Hypothetical protein. | 0.529 |
MYP_1753 | MYP_1185 | Retaining beta-glycosidase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | Endoglucanase-like protein. | 0.798 |
MYP_1753 | MYP_1796 | Retaining beta-glycosidase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | Endoglucanase-like protein. | 0.770 |
MYP_1753 | MYP_3786 | Retaining beta-glycosidase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | Hypothetical protein. | 0.520 |
page 1 of 3