STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYP_4128Putative multidrug resistance ABC transporter ATP-binding/permease protein YheI. (593 aa)    
Predicted Functional Partners:
MYP_3779
Hypothetical protein.
  
 0.929
MYP_400
Non-ribosomal peptide synthetase module containing protein.
  
 0.912
MYP_4125
Xenobiotic ABC transporter ATP-binding protein.
  
  
 
0.895
MYP_398
Beta-ketoacyl synthase.
  
 0.875
pstB-2
Phosphate ABC transporter ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.866
MYP_2778
Xenobiotic-transporting ATPase.
 
 
 
0.861
MYP_3932
ABC transporter ATP-binding protein.
 
 
 
0.856
MYP_397
Polyketide synthase.
   
 0.840
MYP_699
Tetratricopeptide repeat family protein.
    
 0.837
MYP_2418
Phosphonate-transporting ATPase.
 
    
0.733
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
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