STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYP_4132Hypothetical protein. (151 aa)    
Predicted Functional Partners:
MYP_4133
Preprotein translocase subunit YajC.
       0.685
MYP_240
Hypothetical protein CHU_2718.
  
     0.669
MYP_4134
Hypothetical protein.
       0.661
coaE
dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
       0.660
MYP_2208
Hypothetical protein CHU_1553.
  
     0.591
MYP_4131
Isocitrate dehydrogenase.
       0.585
MYP_2206
Hypothetical protein.
  
     0.582
MYP_4130
Gas vesicle protein.
       0.580
MYP_933
uroporphyrinogen-III synthase.
  
     0.516
MYP_2336
Hypothetical protein.
  
     0.513
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.